STMiner
latest
Contents:
Introduction
Installation
Tutorial
API
STMiner
Welcome to STMiner’s documentation!
Edit on GitHub
Welcome to STMiner’s documentation!
Contents:
Introduction
Abstract
Algorithm Detail
Find SVG
Fit the Guassian Mixture Model
Build the Distance Array
Multidimensional scaling & Cluster the genes
Installation
pip
Tutorial
Zebrafish
import package
Load data
Find SVG
Fit GMM
Build distance array
build distance matrix & clustering
Result & Visualization
Additional function - Marked region (Disable in current version)
API
Attribute of STMiner
Methods of STMiner
load data
preprocess
fit model
build distance array & clustering
visualization
Indices and tables
Index
Module Index
Search Page
Read the Docs
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Versions
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Downloads
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